The detailed information of tRNA gene sequence


Sequence ID>SRA1000405
Genome IDSRR001042.67671
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 23
End posion on genome 98
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position
tatattttaa
tRNA gene sequence
GGGCCTGTAGCTCAGTTGGTAGAGCAGCTGACTCTTAATCAGCGGGTCTGGGGTTCGAGT
CCCCACGGGCCCACCA
Downstream region at tRNA end position
agataataag
Secondary structure (Cloverleaf model)
>SRA1000405	Lys	CTT
                   a      ACCA agataataag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     A C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       T G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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