The detailed information of tRNA gene sequence


Sequence ID>SRA1000415
Genome IDSRR001042.96387
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 19
End posion on genome 104
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aataactcat
tRNA gene sequence 
GCCCTCGTGGTGAAATTGGTAGACACAAAGGACTTAAAATCCTTGCCGCTTGCGGAGTGC
CAGTTCGAGTCTGGCCGAGGGCACCA
Downstream region at tRNA end position 
acnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000415	Leu	TAA
                   t      ACCA acnnnnnnnn
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T G
                    T     C G G T C     A
      T A A        G      | | | | |     G
    T       A G T G       G C C A G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     GCCGCTTGCGGAGT
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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