The detailed information of tRNA gene sequence


Sequence ID>SRA1000416
Genome IDSRR001042.98311
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 49
End posion on genome 124
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaaacatcat
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACCTGGTTTGGGACCAGGGGGTCGGGAGTTCGAA
TCTCTCCGCCCCGACCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000416	Pro	TGG
                   t      ACCn nnnnnnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C T C     A
      C G A        A      | + | | |     G
    C       C G C G       G G G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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