The detailed information of tRNA gene sequence


Sequence ID>SRA1000417
Genome IDSRR001042.99081
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 104
End posion on genome 29
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aaacctttca
tRNA gene sequence 
GGGCTCTTAGCTCAGTTGGTTCAGAGCACCTGCCTTACAAGCAGGGGGTCGCTGGTTCGA
ATCCAGCAGGGCCCACtt
Downstream region at tRNA end position 
aacaaaaccc
Secondary structure (Cloverleaf model)
>SRA1000417	Val	TAC
                   a      ACtt aacaaaaccc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T A
                    T     C G A C C     A
    T T G A        A      | | | | |     G
  G         C T C G       G C T G G     C
  G         | | | |                 T T
  T         G A G C
    T C A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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