The detailed information of tRNA gene sequence


Sequence ID>SRA1000419
Genome IDSRR001042.101041
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 87
End posion on genome 11
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tatctttata
tRNA gene sequence 
GCCCTGATAGTTTTTAATGGTTAAAACAGGCCCTTGGTAAGGGTCAGTTCCCAGTTCGAT
TCTGGGTCAGGGCACCT
Downstream region at tRNA end position 
acgaattaat
Secondary structure (Cloverleaf model)
>SRA1000419	Thr	GGT
                   a      ACCT acgaattaat
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     A - T          T T
                    T     G G G T C     A
    A A T T        A      | | | | |     G
  T         T T T G       C C C A G     C
  G         | | | |                 T T
  G         A A A C
    T T A          A     AGTT
                    G - C
                    G + T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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