The detailed information of tRNA gene sequence


Sequence ID>SRA1000424
Genome IDSRR001042.114938
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 87
End posion on genome 13
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aacacctttc
tRNA gene sequence 
GGTCCCTTCGTCTATCGGTTAGGACACGTGGTTTTCATCCTCGAAAGAGGGGTTCGATTC
CCCTAGGGACCGCCA
Downstream region at tRNA end position 
ctaaatatgt
Secondary structure (Cloverleaf model)
>SRA1000424	Glu	TTC
                   c      GCCA ctaaatatgt
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAG
                    C - G
                    G - C
                    T   T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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