The detailed information of tRNA gene sequence


Sequence ID>SRA1000431
Genome IDSRR001042.121700
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 11
End posion on genome 95
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tgaaaaccta
tRNA gene sequence 
GGGCGAATGGCGGAACTGGTAGACGCGCACGACTCAAAATCGTGTTTCGCAAGAAGTGAG
AGTTCGATTCTCTCTTCGCCCACCA
Downstream region at tRNA end position 
agtaactatg
Secondary structure (Cloverleaf model)
>SRA1000431	Leu	CAA
                   a      ACCA agtaactatg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T          T T
                    T     C T C T C     A
      C A A        G      | | | | |     G
    T       G G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTTCGCAAGAAGT
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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