The detailed information of tRNA gene sequence


Sequence ID>SRA1000448
Genome IDSRR001042.152400
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 90
End posion on genome 16
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
aaaataattt
tRNA gene sequence 
TGGGGTGTAGCCAAGTGGTAAGGCAGCGGTTTTTGGTACCGCCATTCCTAGGTTCGAATC
CTAGCACCCCAGCCA
Downstream region at tRNA end position 
aatatgaaca
Secondary structure (Cloverleaf model)
>SRA1000448	Gln	TTG
                   t      GCCA aatatgaaca
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G A T C C     A
        G A        A      | | | | |     G
      T     A C C G       C T A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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