The detailed information of tRNA gene sequence


Sequence ID>SRA1000454
Genome IDSRR001042.164297
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 10
End posion on genome 83
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
nttgggtgtt
tRNA gene sequence 
GCGGGTGTAGTTCAATGGTAGAACGCTAGCCTTCCAAGCTGGATGTAAGGGTTCGATTCC
CTTTACCCGCTCCA
Downstream region at tRNA end position 
aaaattaaaa
Secondary structure (Cloverleaf model)
>SRA1000454	Gly	TCC
                   t      TCCA aaaattaaaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G + T          T T
                    T     T T C C C     A
        A A        A      | | | | |     G
      T     C T T G       A A G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     ATGT
                    C - G
                    T + G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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