The detailed information of tRNA gene sequence


Sequence ID>SRA1000457
Genome IDSRR001042.167211
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 10
End posion on genome 86
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
naatataaat
tRNA gene sequence 
CGGGTTATAGCGCAGTTTGGTAGCGCATCCGTCTGGGGGGCGGAAGGTCGCAGGTTCAAA
TCCTGCTAACCCGACCA
Downstream region at tRNA end position 
tcnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000457	Pro	GGG
                   t      ACCA tcnnnnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     A - T          T A
                    T     C G T C C     A
      T G A        A      | | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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