The detailed information of tRNA gene sequence


Sequence ID>SRA1000465
Genome IDSRR001042.180056
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 27
End posion on genome 103
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcataagttt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGTACACTCATAATGTATTGGTCCCAGGTTCGAG
TCCTGGCGGGCCCACCA
Downstream region at tRNA end position 
aaccttttaa
Secondary structure (Cloverleaf model)
>SRA1000465	Met	CAT
                   t      ACCA aaccttttaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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