The detailed information of tRNA gene sequence


Sequence ID>SRA1000467
Genome IDSRR001042.181986
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 20
End posion on genome 105
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gacaatttaa
tRNA gene sequence 
GGCGTTGTGGCGGAATGGTAGACGCGCCGGATTCAAAATCCGGTGAGGGCAACCTCGTGA
GAGTTCGAGTCTCTCCAGCGCTACCA
Downstream region at tRNA end position 
tcagnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000467	Leu	CAA
                   a      ACCA tcagnnnnnn
                     G + T
                     G - C
                     C - G
                     G - C
                     T + G
                     T - A
                     G - C          T G
                    T     C T C T C     A
      T A A        G      | | | | |     G
    G       G G C G       G A G A G     C
    G         | | |                 T T
    T       A C G C
      A G          G     TGAGGGCAACCTCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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