The detailed information of tRNA gene sequence


Sequence ID>SRA1000479
Genome IDSRR001042.203941
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 89
End posion on genome 15
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
agcagcttct
tRNA gene sequence
GGTCCCTTCGTCTATCGGTTAGGACACGTGGTTTTCATCCTCGAAAGAGGGGTTCGATTC
CCCTAGGGACCGCCA
Downstream region at tRNA end position
tcatgaaaaa
Secondary structure (Cloverleaf model)
>SRA1000479	Glu	TTC
                   t      GCCA tcatgaaaaa
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAG
                    C - G
                    G - C
                    T   T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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