The detailed information of tRNA gene sequence


Sequence ID>SRA1000483
Genome IDSRR001042.221415
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 117
End posion on genome 33
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position
nnnnnnnnnn
tRNA gene sequence
GGGCGAATGGCGGAACTGGTAGACGCGCACGACTCAAAATCGTGTTTCGCAAGAAGTGAG
AGTTCGATTCTCTCTTCGCCCACCA
Downstream region at tRNA end position
agttaaatgg
Secondary structure (Cloverleaf model)
>SRA1000483	Leu	CAA
                   n      ACCA agttaaatgg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T          T T
                    T     C T C T C     A
      C A A        G      | | | | |     G
    T       G G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTTCGCAAGAAGT
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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