The detailed information of tRNA gene sequence


Sequence ID>SRA1000485
Genome IDSRR001042.227803
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 117
End posion on genome 43
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
nnngcaattc
tRNA gene sequence
GGTCCCTTCGTCTATCGGTTAGGACACGTGGTTTTCATCCTCGAAAGAGGGGTTCGATTC
CCCTAGGGACCGCCA
Downstream region at tRNA end position
aaaatatgta
Secondary structure (Cloverleaf model)
>SRA1000485	Glu	TTC
                   c      GCCA aaaatatgta
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAG
                    C - G
                    G - C
                    T   T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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