The detailed information of tRNA gene sequence


Sequence ID>SRA1000495
Genome IDSRR001042.251206
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 101
End posion on genome 24
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
aattcttatg
tRNA gene sequence 
GTGGCTGTAGCTCAGTTGGTTAAGAGCGCTGGTTTGTGGTACCGGAGGCCGGGGGTTCAA
ATCCCCTCAGCCACCCCA
Downstream region at tRNA end position 
ttttatttct
Secondary structure (Cloverleaf model)
>SRA1000495	His	GTG
                   g      CCCA ttttatttct
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
    T T G A        A      + | | | |     A
  G         C T C G       G G G G G     C
  G         | | | |                 T T
  T         G A G C
    T A A          G     AGGCC
                    C - G
                    T + G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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