The detailed information of tRNA gene sequence


Sequence ID>SRA1000508
Genome IDSRR001042.288230
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 36
End posion on genome 112
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gagtctcgtg
tRNA gene sequence 
GCGGGCGTAGCTCAGTTGGTTAGAGCGCTGGATTGTGGCTCCGGAGGCCGTGGGTTCGAA
CCCCATCGCTCGCCCCA
Downstream region at tRNA end position 
annnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000508	His	GTG
                   g      CCCA annnnnnnnn
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          C A
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    T + G
                    G - C
                    G - C
                    A - T
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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