The detailed information of tRNA gene sequence


Sequence ID>SRA1000513
Genome IDSRR001042.302412
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 54
End posion on genome 127
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagtttaaag
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTTAGAGCGCCCGGCTCATAACCGGTAGGTCCCAGGTTCAAG
CCCTGGTGGGCCCAacn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000513	Met	CAT
                   g      Aacn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          C G
                    T     G G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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