The detailed information of tRNA gene sequence


Sequence ID>SRA1000519
Genome IDSRR001042.310177
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 99
End posion on genome 23
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnnnnntt
tRNA gene sequence 
GGGGAATTAGCTCAGCTGGCTAGAGCACTTGATTTGCATTCAAGAGGTCGTGGGTTCGAC
TCCCACATTCTCCACTA
Downstream region at tRNA end position 
aaacgttcat
Secondary structure (Cloverleaf model)
>SRA1000519	Ala	TGC
                   t      ACTA aaacgttcat
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T C
                    T     C A C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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