The detailed information of tRNA gene sequence


Sequence ID>SRA1000520
Genome IDSRR001042.313604
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 33
End posion on genome 107
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gatatagcgc
tRNA gene sequence 
GGTCCCTTCGTCTATCGGTTAGGACGCCAGGTTTTCAACCTGGAAAGAGGGGTTCGATTC
CCCTAGGGACTGCCA
Downstream region at tRNA end position 
ttttaaaaga
Secondary structure (Cloverleaf model)
>SRA1000520	Glu	TTC
                   c      GCCA ttttaaaaga
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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