The detailed information of tRNA gene sequence


Sequence ID>SRA1000523
Genome IDSRR001042.327185
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 122
End posion on genome 46
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
CCGGCCTTAGCTCAGTTGGTTAGAGCGCTGGATTGTGGATCCAGAGGTCCCCCGTTCAAA
CCGGGGAGGCGGTACCA
Downstream region at tRNA end position 
taatatgaag
Secondary structure (Cloverleaf model)
>SRA1000523	His	GTG
                   n      ACCA taatatgaag
                     C   T
                     C - G
                     G   G
                     G - C
                     C - G
                     C - G
                     T - A          C A
                    T     G G G G C     A
      T G A        A      | | | | |     A
    T       C T C G       C C C C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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