The detailed information of tRNA gene sequence


Sequence ID>SRA1000525
Genome IDSRR001042.327821
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 104
End posion on genome 30
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
acattaatta
tRNA gene sequence 
GGTCCCATCGTCTAACGGTTAGGACAGATGGTTTTCAATCATCTAATCGGGGTTCGATTC
CCCGTGGGACCGCCA
Downstream region at tRNA end position 
aaatattatg
Secondary structure (Cloverleaf model)
>SRA1000525	Glu	TTC
                   a      GCCA aaatattatg
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G C C C C     A
      C A A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     TAAT
                    G - C
                    A - T
                    T - A
                    G - C
                    G + T
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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