The detailed information of tRNA gene sequence


Sequence ID>SRA1000551
Genome IDSRR001044.35845
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 113
End posion on genome 38
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
aaacggatgt
tRNA gene sequence
GCCGCCGTCGTCTAATTGGTTAGGACATAAGACTTTCAATCTTATAACAGGGGTTCGAAT
CCCCTCGGCGGTACCA
Downstream region at tRNA end position
attatgataa
Secondary structure (Cloverleaf model)
>SRA1000551	Glu	TTC
                   t      ACCA attatgataa
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
      T A A        C      | | | | |     G
    T       T C T G       A G G G G     C
    G       + | | |                 T T
    G       G G A C
      T T A        A     TAAC
                    T - A
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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