The detailed information of tRNA gene sequence


Sequence ID>SRA1000567
Genome IDSRR001044.78540
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 3
End posion on genome 77
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
nnnnnnnntg
tRNA gene sequence 
GTGGCCTTAGTGTTAGTGGTTAGCACATAAGGTTGTGGCCCTTAGGGGACTGGTTCAAAT
CCAGTAGGTNCCCCAa
Downstream region at tRNA end position 
aaacacgtgg
Secondary structure (Cloverleaf model)
>SRA1000567	His	GTG
                   g      CCAa aaacacgtgg
                     G - C
                     T   C
                     G   N
                     G + T
                     C - G
                     C - G
                     T - A          T A
                    T     T G A C C     A
      G A T        A      | | | | |     A
    T       T G T G       A C T G G     C
    G       + | | |                 T T
    G       G C A C
      T T A        A     GGGG
                    T - A
                    A - T
                    A - T
                    G - C
                    G - C
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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