The detailed information of tRNA gene sequence


Sequence ID>SRA1000571
Genome IDSRR001044.94300
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 94
End posion on genome 11
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tntaatttat
tRNA gene sequence 
GCCTAATTGACCCGAAGTGGTAAGGGTACCGTCTGCAAAACGGTAGCGAAAGCATCGTTG
GTTCGATTCCGACATTGGGCTCCA
Downstream region at tRNA end position 
tttccattag
Secondary structure (Cloverleaf model)
>SRA1000571	Cys	GCA
                   t      TCCA tttccattag
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T
                     A - T
                     T - A          T T
                    T     C A G C C     A
      A A G        G      | | + | |     G
    G       C C C A       G T T G G     C
    T         | |                   T T
    G       A G G G
      G T A        T     AGCGAAAGCATC
                    A - T
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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