The detailed information of tRNA gene sequence


Sequence ID>SRA1000601
Genome IDSRR001044.190339
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 114
End posion on genome 39
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaacggatgt
tRNA gene sequence 
GCCGCCGTCGTCTAATTGGTTAGGACATAAGACTTTCAATCTTATAACAGGGGTTCGAAT
CCCCTCGGCGGTACCA
Downstream region at tRNA end position 
attatgataa
Secondary structure (Cloverleaf model)
>SRA1000601	Glu	TTC
                   t      ACCA attatgataa
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
      T A A        C      | | | | |     G
    T       T C T G       A G G G G     C
    G       + | | |                 T T
    G       G G A C
      T T A        A     TAAC
                    T - A
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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