The detailed information of tRNA gene sequence


Sequence ID>SRA1000604
Genome IDSRR001044.200322
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 10
End posion on genome 84
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
nggtcaccat
tRNA gene sequence 
CCCCTCCTAGTTCAAGGGACAGAACACAGGCGTCCTAAGCCAAAGATCCCAGTTCGAATC
TGGGGGAGGGGACCA
Downstream region at tRNA end position 
acagttgcat
Secondary structure (Cloverleaf model)
>SRA1000604	Arg	CCT
                   t      ACCA acagttgcat
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     C - G          T A
                    T     G G G T C     A
      G A A        A      | | | | |     G
    G       C T T G       C C C A G     C
    G       | | | |                 T T
    A       G A A C
      C A          A     AGAT
                    C   A
                    A   A
                    G - C
                    G - C
                    C - G
                  G       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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