The detailed information of tRNA gene sequence


Sequence ID>SRA1000609
Genome IDSRR001044.216971
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 86
End posion on genome 11
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
gctacagtgn
tRNA gene sequence 
GGACCTATAGCTCAGCGGTCAGAGCACGTGCCTTATAAGCGCGTGGCCGTGGGTTCAAGT
CCCACTAGGTCTACCA
Downstream region at tRNA end position 
agtaggagaa
Secondary structure (Cloverleaf model)
>SRA1000609	Ile	TAT
                   n      ACCA agtaggagaa
                     G + T
                     G - C
                     A - T
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     C A C C C     A
      C G A        A      | | | | |     A
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     TGGCC
                    C - G
                    G - C
                    T + G
                    G - C
                    C - G
                  C       A
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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