The detailed information of tRNA gene sequence


Sequence ID>SRA1000622
Genome IDSRR001044.260748
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 117
End posion on genome 40
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
gtggtggtaa
tRNA gene sequence
AGGGCCTTAGCTTAGTCCGGTTAAAGCAAGCGGCTCATAATCGCTAGACCCCCGGTTCAA
ATCCGGGAGGCCCCACCA
Downstream region at tRNA end position
ttttgagtaa
Secondary structure (Cloverleaf model)
>SRA1000622	Met	CAT
                   a      ACCA ttttgagtaa
                     A   C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     G G G C C     A
    C T G A        A      | | | | |     A
  C         T T C G       C C C G G     C
  G         | | | |                 T T
  G         A A G C
    T T A          A     AGACC
                    A - T
                    G - C
                    C - G
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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