The detailed information of tRNA gene sequence


Sequence ID>SRA1000626
Genome IDSRR001044.277965
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 19
End posion on genome 93
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
aaacaagtaa
tRNA gene sequence 
GCGCCTATAGCTCAACTGGATAGAGCGCCTGCCTTCGAAGCAGGAGGTTCCAGGTTCAAC
TCCTGGTGGGCGCACat
Downstream region at tRNA end position 
tggcaannnn
Secondary structure (Cloverleaf model)
>SRA1000626	Arg	TCG
                   a      ACat tggcaannnn
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T C
                    T     G G T C C     A
      C A A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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