The detailed information of tRNA gene sequence


Sequence ID>SRA1000639
Genome IDSRR001045.45742
Search identical group
Phylum/ClassStromatolites, viral fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000137)
Species
Start position on genome 112
End posion on genome 36
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGCCCCGTATCACAATCGGTTAGTGGAGCGTCCTCATAAGGCGTAATGTCTCGGTTCAAG
TCCGAGCGGGGCCACCA
Downstream region at tRNA end position 
aaacacggcc
Secondary structure (Cloverleaf model)
>SRA1000639	Met	CAT
                   n      ACCA aaacacggcc
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     G A G C C     A
      T A A        A      | | | | |     A
    C       C A C T       C T C G G     C
    G       | | | +                 T T
    G       G T G G
      T T A        A     AATGT
                    G + T
                    C - G
                    G - C
                    T + G
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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