The detailed information of tRNA gene sequence


Sequence ID>SRA1000643
Genome IDSRR001045.146463
Search identical group
Phylum/ClassStromatolites, viral fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000137)
Species
Start position on genome 87
End posion on genome 12
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cttcatacga
tRNA gene sequence 
TNCGGGGTGGAGAAGCGGTCATCTCAGGTGTCTCATACGCACCGGAACGCAGGTTCGAAT
CCTGTCTCCGCAACCA
Downstream region at tRNA end position 
aggcttgggg
Secondary structure (Cloverleaf model)
>SRA1000643	Met	CAT
                   a      ACCA aggcttgggg
                     T - A
                     N   C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     G
    G       A G A G       G C A G G     C
    G       | | | |                 T T
    T       T C T C
      C A          A     GGAAC
                    G - C
                    G - C
                    T - A
                    G - C
                    T + G
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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