The detailed information of tRNA gene sequence


Sequence ID>SRA1000646
Genome IDSRR001045.176687
Search identical group
Phylum/ClassStromatolites, viral fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000137)
Species
Start position on genome 99
End posion on genome 27
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
gctaagttaa
tRNA gene sequence 
GCGCCGTTAGCTCAGCGGTAAGAGCACTCGTCTTATACACGAGCGGTCGTGAGTTCAATC
CTCACACGGCGTAttt
Downstream region at tRNA end position 
aatataacag
Secondary structure (Cloverleaf model)
>SRA1000646	Ile	TAT
                   a      Attt aatataacag
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          C T
                    T     C A C T C     A
      C G A        A      | | | | |     A
    G       C T C G       G T G A G     C
    G       | | | |                 T T
    T       G A G C
      A A          A     CGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    T - A
                  C       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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