The detailed information of tRNA gene sequence


Sequence ID>SRA1000652
Genome IDSRR001045.328814
Search identical group
Phylum/ClassStromatolites, viral fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000137)
Species
Start position on genome 108
End posion on genome 31
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnttggaaa
tRNA gene sequence 
GCCCTTATAACATAATCGGTTAATGTAAACACCTCATAAGTGTGAGAAGGAGCGGTTCGA
ATCCGCCTAGGGGCACCA
Downstream region at tRNA end position 
ccttaacaat
Secondary structure (Cloverleaf model)
>SRA1000652	Met	CAT
                   a      ACCA ccttaacaat
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     T - A
                     A - T          T A
                    T     C C G C C     A
      T A A        A        | | | |     G
    C       T A C A       A G C G G     C
    G       | | | |                 T T
    G       A T G T
      T T A        A     AGAAGG
                    A   G
                    A - T
                    C - G
                    A - T
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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