The detailed information of tRNA gene sequence


Sequence ID>SRA1000655
Genome IDSRR001045.382454
Search identical group
Phylum/ClassStromatolites, viral fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000137)
Species
Start position on genome 84
End posion on genome 7
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ttccaaattt
tRNA gene sequence 
GCGCTGTTAGCTCAGTCTGGATAGAGCATGTTGTTTCTACCAACACGGTCAAAGGTTCAA
ATCCTTTACGGCGCACCA
Downstream region at tRNA end position 
atcaagnnnn
Secondary structure (Cloverleaf model)
>SRA1000655	Arg	TCT
                   t      ACCA atcaagnnnn
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     G - C
                     T - A          T A
                    T     T T T C C     A
    C T G A        A      | | | | |     A
  T         C T C G       A A A G G     C
  G         | | | |                 T T
  G         G A G C
    A T A          A     CGGTC
                    T - A
                    G - C
                    T - A
                    T - A
                    G - C
                  T       C
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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