The detailed information of tRNA gene sequence


Sequence ID>SRA1000656
Genome IDSRR001046.2986
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 36
End posion on genome 111
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcgctttgct
tRNA gene sequence 
GTCCCGTTCGTCTAGCCAGGTCTAGGACACTGGGTTTTCATCCCAGCAACAGGGGTTCGA
ATCCCCTACGGGACGCtc
Downstream region at tRNA end position 
gcccgcgcta
Secondary structure (Cloverleaf model)
>SRA1000656	Glu	TTC
                   t      GCtc gcccgcgcta
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T C C C C     A
    C C G A        C      | | | | |     G
  A         T C T G       A G G G G     C
  G         + | | |                 T T
  G         G G A C
    T C T A        A     CAAC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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