The detailed information of tRNA gene sequence


Sequence ID>SRA1000672
Genome IDSRR001046.42778
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 92
End posion on genome 19
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tatcgcgggt
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGTAGAGCGCCACGTTTACACCGTGGATGTCATCGGTTCGAGC
CCGGTAGGGCCCACgc
Downstream region at tRNA end position 
gcagaaatta
Secondary structure (Cloverleaf model)
>SRA1000672	Val	TAC
                   t      ACgc gcagaaatta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A          C G
                    T     T G G C C     A
      T G A        A      | + | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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