The detailed information of tRNA gene sequence


Sequence ID>SRA1000679
Genome IDSRR001046.60311
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 30
End posion on genome 105
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ggataccatt
tRNA gene sequence 
GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAAT
CCTGCACGACCCACCA
Downstream region at tRNA end position 
ttctctccac
Secondary structure (Cloverleaf model)
>SRA1000679	Lys	TTT
                   t      ACCA ttctctccac
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T A
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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