The detailed information of tRNA gene sequence


Sequence ID>SRA1000683
Genome IDSRR001046.71277
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 15
End posion on genome 89
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ctgggggcat
tRNA gene sequence 
GGGCCTGTAGCTCAGCTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGAGGTTCAAG
TCCTCCCAGGCCCACtc
Downstream region at tRNA end position 
acccagtccc
Secondary structure (Cloverleaf model)
>SRA1000683	Ile	GAT
                   t      ACtc acccagtccc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C C T C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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