The detailed information of tRNA gene sequence


Sequence ID>SRA1000684
Genome IDSRR001046.71381
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 107
End posion on genome 33
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttgatagaga
tRNA gene sequence 
GGCCCCATCGTTTAGCGGCCTAGGACGCCGCCCTTTCACGGCGGTAGCACGGGTTCGAAT
CCCGTTGGGTCACGAa
Downstream region at tRNA end position 
gcgttgggaa
Secondary structure (Cloverleaf model)
>SRA1000684	Glu	TTC
                   a      CGAa gcgttgggaa
                     G   A
                     G - C
                     C   T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T T T G       A C G G G     C
    G       + + | |                 T T
    C       G G A C
      C T A        G     TAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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