The detailed information of tRNA gene sequence


Sequence ID>SRA1000689
Genome IDSRR001046.89850
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 29
End posion on genome 102
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttcaccactt
tRNA gene sequence 
GGTGGAGTGGCCGAGAGGCGAGGCAACGGACTGCAAATCCGTGTACACGGGTTCGAATCC
CGTCTCCACCTCGA
Downstream region at tRNA end position 
acaacacaaa
Secondary structure (Cloverleaf model)
>SRA1000689	Cys	GCA
                   t      TCGA acaacacaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G C C C     A
        G A        G      | | | | |     G
      A     G C C G       A C G G G     C
      G       | | |                 T T
      G     A G G C
        C G        A     GTAC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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