The detailed information of tRNA gene sequence


Sequence ID>SRA1000690
Genome IDSRR001046.90291
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 11
End posion on genome 85
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcaaagctaa
tRNA gene sequence 
GGTCTGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG
TCCCGTCCAGACCGCat
Downstream region at tRNA end position 
caaaaaaaga
Secondary structure (Cloverleaf model)
>SRA1000690	Asp	GTC
                   a      GCat caaaaaaaga
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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