The detailed information of tRNA gene sequence


Sequence ID>SRA1000691
Genome IDSRR001046.92295
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 103
End posion on genome 19
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
nnnnnnnttg
tRNA gene sequence 
GCCGACGTGGTGGAATTGGTAGACACGCTATCTTGAGGGGGTAGTGGCGAAAGCTGTGCG
AGTTCGAGTCTCGCCGTCGGCACCA
Downstream region at tRNA end position 
atcnaaaaat
Secondary structure (Cloverleaf model)
>SRA1000691	Leu	GAG
                   g      ACCA atcnaaaaat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     C G C T C     A
      T A A        G      | | | | |     G
    T       G G T G       G C G A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGGCGAAAGCTGT
                    C - G
                    T - A
                    A - T
                    T + G
                    C - G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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