The detailed information of tRNA gene sequence


Sequence ID>SRA1000694
Genome IDSRR001046.94763
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 89
End posion on genome 14
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
attgaataga
tRNA gene sequence 
GCCGGCATAGCTCAGCTGGTAGAGCAACTGATTTGTAATCAGTAGGTCCCGGGTTCGACT
CCTGGTGCCGGCACCA
Downstream region at tRNA end position 
tcaataactt
Secondary structure (Cloverleaf model)
>SRA1000694	Thr	TGT
                   a      ACCA tcaataactt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     G G T C C     A
      C G A        A      | | + | |     G
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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