The detailed information of tRNA gene sequence


Sequence ID>SRA1000695
Genome IDSRR001046.98101
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 4
End posion on genome 78
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnnnnccg
tRNA gene sequence 
AGGGCTGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGCGGTTGGGGGGTTCAAG
TCCCTTCGGCCCTGCtg
Downstream region at tRNA end position 
atcggtcccc
Secondary structure (Cloverleaf model)
>SRA1000695	Trp	CCA
                   g      GCtg atcggtcccc
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     G - C          T G
                    T     T T C C C     A
      T A A        A      + + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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