The detailed information of tRNA gene sequence


Sequence ID>SRA1000698
Genome IDSRR001046.105326
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 103
End posion on genome 27
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nggatcggtt
tRNA gene sequence 
GGGTCTGTAGCTCAGTCGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGTTGGTTCGAA
TCCAACCAGACCCACCA
Downstream region at tRNA end position 
tgggaactgg
Secondary structure (Cloverleaf model)
>SRA1000698	Ile	GAT
                   t      ACCA tgggaactgg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C A A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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