The detailed information of tRNA gene sequence


Sequence ID>SRA1000703
Genome IDSRR001046.122342
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 24
End posion on genome 114
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taactttgat
tRNA gene sequence 
GGAGTAGTACTCAAGTGGCTGAAGAGGTGCCCCTGCTAAGGGTATAGGCCGGTAACCCCG
GTGCGAGAGTTCAAATCTCTCCTACTCCGCCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000703	Ser	GCT
                   t      GCCn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G A G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGCCGGTAACCCCGGTGC
                    T - A
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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