The detailed information of tRNA gene sequence


Sequence ID>SRA1000706
Genome IDSRR001046.138553
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 48
End posion on genome 120
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position
aaccgggaac
tRNA gene sequence
GGGCGGTTAGCTCAGCGGTAGAGCACTACGTTGACATCGTAGGGGTNACTGGTTCGATCC
CAGTACCGCCACCnn
Downstream region at tRNA end position
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000706	Val	GAC
                   c      CCnn nnnnnnnnnn
                     G   A
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C T
                    T     T G A C C     A
        G A        A      | | | | |     G
      C     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTN
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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