The detailed information of tRNA gene sequence


Sequence ID>SRA1000710
Genome IDSRR001046.155208
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 33
End posion on genome 109
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aataatttac
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCATCGGTTCGAC
TCCGATATTCTCCNCAA
Downstream region at tRNA end position 
aaaagnnnnn
Secondary structure (Cloverleaf model)
>SRA1000710	Ala	TGC
                   c      NCAA aaaagnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T C
                    T     T A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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