The detailed information of tRNA gene sequence


Sequence ID>SRA1000717
Genome IDSRR001046.177045
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 12
End posion on genome 85
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttggtctcac
tRNA gene sequence 
GGTGGAGTGGCCGAGAGGCGAGGCAGCGGCCTGCAAAGCCGTCTACACGGGTTCGAATCC
CGTCTTCACCTCGA
Downstream region at tRNA end position 
agtaaaactg
Secondary structure (Cloverleaf model)
>SRA1000717	Cys	GCA
                   c      TCGA agtaaaactg
                     G - C
                     G - C
                     T - A
                     G - C
                     G + T
                     A - T
                     G - C          T A
                    T     T G C C C     A
        G A        G      | | | | |     G
      A     G C C G       A C G G G     C
      G       | | |                 T T
      G     A G G C
        C G        A     CTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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